STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC98286.1Conserved hypothetical integral membrane protein. (77 aa)    
Predicted Functional Partners:
SDC23001.1
Protein of unknown function.
  
     0.567
SDC20116.1
Uncharacterized protein YozE, UPF0346 family; Belongs to the UPF0346 family.
  
     0.563
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
       0.563
SDC15174.1
Cell division protein DivIC.
  
     0.547
SDC01448.1
ABC-2 type transport system permease protein.
  
     0.545
SDC20009.1
Uncharacterized protein YpmS.
  
     0.526
SDC19961.1
Lysophospholipase L1.
  
     0.491
SDC26082.1
Tetratricopeptide repeat-containing protein.
  
     0.472
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
       0.470
SDC97995.1
Lipoteichoic acid synthase.
 
     0.447
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.