STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD21371.1PTS system, mannose-specific IIC component. (268 aa)    
Predicted Functional Partners:
SDD21322.1
PTS system, fructose-specific IID component.
 0.999
SDC77098.1
PTS system, mannose-specific IID component.
 0.997
SDC77187.1
PTS system, mannose-specific IIB component.
 
 0.997
SDC76797.1
PTS system, mannose-specific IID component.
 0.992
SDD21460.1
PTS system, fructose-specific IIA component.
 
 0.986
SDD21413.1
PTS system D-fructose-specific IIB component (F6P-forming), Man family (TC 4.A.6.1.2).
 
 0.984
SDD07703.1
PTS system, mannose-specific IID component.
 0.982
SDD42686.1
PTS system, mannose-specific IIB component.
 
 0.981
SDC76900.1
PTS system, mannose-specific IIB component.
 
 0.977
SDD07622.1
PTS system, mannose-specific IIA component.
 
 0.974
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.