STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD33196.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (207 aa)    
Predicted Functional Partners:
SDC41958.1
Nitroreductase.
 
 
 0.956
SDD33131.1
Glyoxalase family protein.
 
 
 0.956
SDD33093.1
Catechol 2,3-dioxygenase.
 
 
 0.915
SDC62685.1
Phospholipase/carboxylesterase.
 
    0.754
SDC08970.1
Luciferase family oxidoreductase, group 1.
  
 
 0.678
SDC63913.1
Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase).
  
 
 0.678
SDC07361.1
Nicotinamidase-related amidase.
  
 
 0.652
SDC54076.1
NitT/TauT family transport system substrate-binding protein.
  
 
  0.639
SDC53959.1
NitT/TauT family transport system permease protein.
  
 
  0.629
SDD02191.1
Catechol 2,3-dioxygenase.
    
  0.606
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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