STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD38922.1ATP-binding cassette, subfamily B. (583 aa)    
Predicted Functional Partners:
SDD38881.1
ATP-binding cassette, subfamily B.
 
 
0.925
SDC43537.1
Energy-coupling factor transport system ATP-binding protein.
 
   
 
0.909
SDC83654.1
Spermidine/putrescine transport system ATP-binding protein.
 
 
   
0.900
SDC97911.1
Putative ABC transport system ATP-binding protein.
 
     
0.852
SDC78343.1
Putative ABC transport system ATP-binding protein.
 
     
0.794
SDD00196.1
ATP-binding cassette, subfamily B.
 
 
0.676
SDC98681.1
ATP-binding cassette, subfamily B.
 
 
0.656
SDC33757.1
ATP-binding cassette, subfamily C, competence factor transporting protein.
 
 
0.546
SDD38828.1
DNA-binding transcriptional regulator, LysR family.
  
  
 0.502
dnaK
Molecular chaperone DnaK.
  
 0.493
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.