STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD40499.1Glycosyltransferase involved in cell wall bisynthesis. (351 aa)    
Predicted Functional Partners:
SDD40444.1
Polysaccharide transporter, PST family.
 
  
 0.764
SDD40392.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.735
SDD40316.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.695
SDD40355.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing).
  
  
 0.533
SDD08584.1
UDP-N-acetylglucosamine 4-epimerase.
 
 
 0.525
galE
UDP-galactose 4-epimerase.
 
  
 0.501
SDD08475.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.498
galU
UTP--glucose-1-phosphate uridylyltransferase.
 
  
 0.483
SDD40200.1
Glycosyltransferase, GT2 family.
 
    
0.468
SDD31306.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
 
 0.466
Your Current Organism:
Marinilactibacillus psychrotolerans
NCBI taxonomy Id: 191770
Other names: DSM 19582, IAM 14980, JCM 21451, M. psychrotolerans, Marinilactibacillus psychrotolerans Ishikawa et al. 2003, Marinolactobacillus psychrotolerans, NBRC 100002, NCIMB 13873, NRIC 0510, strain M13-2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.