STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162725_00282Unannotated protein. (155 aa)    
Predicted Functional Partners:
GCA_900162725_00281
Unannotated protein.
     
 0.788
GCA_900162725_00279
Unannotated protein.
 
    0.783
GCA_900162725_00280
Unannotated protein.
     
 0.760
GCA_900162725_00278
Unannotated protein.
 
     0.702
GCA_900162725_00283
Unannotated protein.
 
     0.610
GCA_900162725_01436
Unannotated protein.
  
 0.606
GCA_900162725_02785
Unannotated protein.
    
   0.461
GCA_900162725_02682
Unannotated protein.
  
     0.458
GCA_900162725_00364
Unannotated protein.
   
 
  0.455
GCA_900162725_03265
Unannotated protein.
    
   0.444
Your Current Organism:
Parabacteroides sp. MarseilleP3160
NCBI taxonomy Id: 1917887
Other names: P. sp. Marseille-P3160, Parabacteroides sp. Marseille-P3160
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.