STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162725_00633Unannotated protein. (134 aa)    
Predicted Functional Partners:
GCA_900162725_02660
Unannotated protein.
  
  
  0.759
GCA_900162725_02413
Unannotated protein.
  
     0.717
GCA_900162725_03841
Unannotated protein.
  
     0.681
GCA_900162725_02411
Unannotated protein.
  
     0.671
GCA_900162725_02402
Unannotated protein.
 
  
 0.585
GCA_900162725_00293
Unannotated protein.
  
     0.563
GCA_900162725_00292
Unannotated protein.
 
     0.543
GCA_900162725_01690
Unannotated protein.
  
     0.511
GCA_900162725_02410
Unannotated protein.
  
     0.501
GCA_900162725_02030
Unannotated protein.
  
     0.492
Your Current Organism:
Parabacteroides sp. MarseilleP3160
NCBI taxonomy Id: 1917887
Other names: P. sp. Marseille-P3160, Parabacteroides sp. Marseille-P3160
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.