STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001896545_02108Unannotated protein. (354 aa)    
Predicted Functional Partners:
GCA_001896545_00877
Unannotated protein.
  
 
 0.896
GCA_001896545_02279
Unannotated protein.
  
 
 0.896
GCA_001896545_01921
Unannotated protein.
    
   0.799
GCA_001896545_01929
Unannotated protein.
    
   0.799
GCA_001896545_00171
Unannotated protein.
    
  0.717
GCA_001896545_00146
Unannotated protein.
  
 
  0.564
GCA_001896545_02107
Unannotated protein.
       0.518
GCA_001896545_02105
Unannotated protein.
 
    0.473
GCA_001896545_02106
Unannotated protein.
 
     0.429
GCA_001896545_01107
Unannotated protein.
  
    0.424
Your Current Organism:
Tepidanaerobacter sp. EBM38
NCBI taxonomy Id: 1918496
Other names: T. sp. EBM-38, Tepidanaerobacter sp. EBM-38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.