STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001896565_01413Unannotated protein. (345 aa)    
Predicted Functional Partners:
GCA_001896565_00459
Unannotated protein.
    
 0.776
GCA_001896565_01412
Unannotated protein.
  
    0.775
GCA_001896565_00900
Unannotated protein.
    
  0.700
GCA_001896565_01202
Unannotated protein.
  
 
  0.665
GCA_001896565_01927
Unannotated protein.
  
 
 0.654
GCA_001896565_00810
Unannotated protein.
  
 
  0.640
GCA_001896565_00448
Unannotated protein.
  
 
  0.635
GCA_001896565_01228
Unannotated protein.
  
 
  0.635
GCA_001896565_00780
Unannotated protein.
  
 
 0.579
GCA_001896565_02029
Unannotated protein.
  
 
 0.579
Your Current Organism:
bacterium EBM40
NCBI taxonomy Id: 1918508
Other names: b. EBM-40, bacterium EBM-40
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.