STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899445_00011Unannotated protein. (85 aa)    
Predicted Functional Partners:
GCA_001899445_00060
Unannotated protein.
    
 
 0.787
GCA_001899445_00012
Unannotated protein.
       0.696
GCA_001899445_00013
Unannotated protein.
       0.635
GCA_001899445_00010
Unannotated protein.
       0.591
GCA_001899445_00009
Unannotated protein.
     
 0.587
GCA_001899445_01615
Unannotated protein.
    
  0.580
GCA_001899445_00008
Unannotated protein.
       0.546
GCA_001899445_00109
Unannotated protein.
  
     0.534
GCA_001899445_01665
Unannotated protein.
  
  
 0.532
GCA_001899445_00016
Unannotated protein.
  
    0.527
Your Current Organism:
Desulfopertinax cowenii
NCBI taxonomy Id: 1919273
Other names: C. Desulfopertinax cowenii, Candidatus Desulfopertinax cowenii, Candidatus Desulfopertinax inferamarinus
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