STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899445_00109Unannotated protein. (567 aa)    
Predicted Functional Partners:
GCA_001899445_00686
Unannotated protein.
  
    0.739
GCA_001899445_00108
Unannotated protein.
 
  
0.663
GCA_001899445_00110
Unannotated protein.
  
  
 0.663
GCA_001899445_00111
Unannotated protein.
  
  
 0.639
GCA_001899445_01107
Unannotated protein.
  
     0.591
GCA_001899445_01131
Unannotated protein.
  
    0.583
GCA_001899445_00689
Unannotated protein.
  
    0.564
GCA_001899445_00112
Unannotated protein.
     
 0.547
GCA_001899445_00688
Unannotated protein.
  
    0.547
GCA_001899445_00011
Unannotated protein.
  
     0.534
Your Current Organism:
Desulfopertinax cowenii
NCBI taxonomy Id: 1919273
Other names: C. Desulfopertinax cowenii, Candidatus Desulfopertinax cowenii, Candidatus Desulfopertinax inferamarinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.