STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899445_00769Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_001899445_00771
Unannotated protein.
     0.989
GCA_001899445_00765
Unannotated protein.
 
 
 0.942
GCA_001899445_00766
Unannotated protein.
 
  
 0.887
GCA_001899445_00770
Unannotated protein.
 
 
  0.851
GCA_001899445_00768
Unannotated protein.
       0.793
GCA_001899445_00718
Unannotated protein.
 
 0.786
GCA_001899445_00762
Unannotated protein.
 
 
  0.774
GCA_001899445_00767
Unannotated protein.
       0.737
GCA_001899445_01231
Unannotated protein.
   
 0.669
GCA_001899445_00764
Unannotated protein.
       0.537
Your Current Organism:
Desulfopertinax cowenii
NCBI taxonomy Id: 1919273
Other names: C. Desulfopertinax cowenii, Candidatus Desulfopertinax cowenii, Candidatus Desulfopertinax inferamarinus
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