STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899445_00947Unannotated protein. (282 aa)    
Predicted Functional Partners:
GCA_001899445_00948
Unannotated protein.
 
  
 0.995
GCA_001899445_00946
Unannotated protein.
 
  
 0.977
GCA_001899445_00949
Unannotated protein.
 
   
 0.940
GCA_001899445_00663
Unannotated protein.
    
  0.868
GCA_001899445_01384
Unannotated protein.
    
  0.866
GCA_001899445_01045
Unannotated protein.
    
  0.864
GCA_001899445_01042
Unannotated protein.
    
  0.806
GCA_001899445_00897
Unannotated protein.
 
   
 0.783
GCA_001899445_00950
Unannotated protein.
     
 0.556
GCA_001899445_00945
Unannotated protein.
       0.538
Your Current Organism:
Desulfopertinax cowenii
NCBI taxonomy Id: 1919273
Other names: C. Desulfopertinax cowenii, Candidatus Desulfopertinax cowenii, Candidatus Desulfopertinax inferamarinus
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