STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001899445_01284Unannotated protein. (122 aa)    
Predicted Functional Partners:
GCA_001899445_01285
Unannotated protein.
 
  
  0.978
GCA_001899445_01282
Unannotated protein.
 
 
  0.956
GCA_001899445_00400
Unannotated protein.
 
 
 0.938
GCA_001899445_01287
Unannotated protein.
 
     0.913
GCA_001899445_01332
Unannotated protein.
 
 
 0.875
GCA_001899445_00719
Unannotated protein.
 
 
 0.856
GCA_001899445_01286
Unannotated protein.
 
     0.842
GCA_001899445_01539
Unannotated protein.
  
 0.807
GCA_001899445_01494
Unannotated protein.
  
 0.796
GCA_001899445_01475
Unannotated protein.
 
 
 0.788
Your Current Organism:
Desulfopertinax cowenii
NCBI taxonomy Id: 1919273
Other names: C. Desulfopertinax cowenii, Candidatus Desulfopertinax cowenii, Candidatus Desulfopertinax inferamarinus
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