STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002083825_01658Unannotated protein. (443 aa)    
Predicted Functional Partners:
GCA_002083825_00570
Unannotated protein.
   
  
 0.757
GCA_002083825_02253
Unannotated protein.
   
  
 0.757
GCA_002083825_02256
Unannotated protein.
   
  
 0.757
GCA_002083825_00460
Unannotated protein.
    
  0.574
GCA_002083825_00571
Unannotated protein.
  
  
 0.523
GCA_002083825_02252
Unannotated protein.
  
  
 0.523
GCA_002083825_00572
Unannotated protein.
  
  
 0.487
GCA_002083825_01308
Unannotated protein.
   
 
 0.487
GCA_002083825_02249
Unannotated protein.
  
  
 0.487
GCA_002083825_01659
Unannotated protein.
       0.455
Your Current Organism:
Sericytochromatia bacterium S15BMN24CBMW_12
NCBI taxonomy Id: 1919279
Other names: C. Sericytochromatia bacterium S15B-MN24 CBMW_12, Candidatus Sericytochromatia bacterium S15B-MN24 CBMW_12, Cyanobacteria/Melainabacteria group bacterium S15B-MN24 CBMW_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.