STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIB11281.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
AIB11185.1
Flagellar basal-body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.878
AIB10568.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.796
AIB11909.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.793
fliE
Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.789
AIB10467.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.785
AIB10591.1
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.785
AIB12349.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.780
AIB11153.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.773
AIB13056.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.773
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.772
Your Current Organism:
Azospirillum brasilense
NCBI taxonomy Id: 192
Other names: A. brasilense, ATCC 29145, Azospirillum brasiliense, LMG 13127, LMG:13127, NBRC 102289, NRRL B-14647, Roseomonas fauriae, Spirillum lipoferum, bacterium ASAZOES-148, strain sp. 7
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