STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIB11958.1Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa)    
Predicted Functional Partners:
fixI
ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.977
AIB11959.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.750
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.731
AIB10430.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.688
fumA
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.663
AIB10436.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.626
AIB10612.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.589
AIB11432.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.535
AIB11960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.485
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
  
 
 0.481
Your Current Organism:
Azospirillum brasilense
NCBI taxonomy Id: 192
Other names: A. brasilense, ATCC 29145, Azospirillum brasiliense, LMG 13127, LMG:13127, NBRC 102289, NRRL B-14647, Roseomonas fauriae, Spirillum lipoferum, bacterium ASAZOES-148, strain sp. 7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.