STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJT22315.1Quercetin 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. (231 aa)    
Predicted Functional Partners:
OJT22314.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
OJT22588.1
Pirin-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.
 
    0.515
OJT17334.1
4,5-DOPA dioxygenase extradiol; Seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.469
OJT19368.1
Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.439
OJT22313.1
YeeE/YedE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.409
OJT22312.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.402
Your Current Organism:
Archangium sp. Cb G35
NCBI taxonomy Id: 1920190
Other names: A. sp. Cb G35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.