STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKY76079.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (189 aa)    
Predicted Functional Partners:
OKY76633.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.940
OKY75567.1
Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
OKY75396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.903
OKY76081.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.878
OKY75805.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.877
OKY74031.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.877
OKY75518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.850
OKY75277.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.841
BM485_10565
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.830
OKY73871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.830
Your Current Organism:
Desulfobulbaceae bacterium DB1
NCBI taxonomy Id: 1920419
Other names: D. bacterium DB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.