STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMF15828.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
OMF15827.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.877
OMF07018.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.705
OMF20786.1
Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.663
OMF16039.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.662
OMF14793.1
Polysaccharide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.662
OMF20999.1
Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.659
OMF11044.1
Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.658
OMF15826.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.653
OMF08792.1
Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.645
OMF19323.1
Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.643
Your Current Organism:
Paenibacillus sp. FSLH70331
NCBI taxonomy Id: 1920421
Other names: P. sp. FSL H7-0331, Paenibacillus sp. FSL H7-0331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.