STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMF08449.1Fucose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)    
Predicted Functional Partners:
OMF08450.1
DUF5060 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.935
OMF08447.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.887
OMF08445.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
OMF08475.1
DUF5060 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.810
OMF08446.1
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
  0.800
OMF08448.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.781
OMF03902.1
Fucose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RbsD / FucU family.
    
 0.777
OME97851.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
OMF08761.1
DUF5060 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.736
OMF19091.1
Rhamnulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.677
Your Current Organism:
Paenibacillus sp. FSLH70331
NCBI taxonomy Id: 1920421
Other names: P. sp. FSL H7-0331, Paenibacillus sp. FSL H7-0331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.