STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrB-2Unannotated protein. (164 aa)    
Predicted Functional Partners:
msrA
Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.990
C7B65_20025
Unannotated protein.
  
 0.740
C7B65_03935
Unannotated protein.
  
 0.685
C7B65_04985
Unannotated protein.
   
 0.685
C7B65_21910
Unannotated protein.
   
 0.679
rplT
Unannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.567
C7B65_23745
Unannotated protein.
  
    0.523
rpsI
Unannotated protein; Belongs to the universal ribosomal protein uS9 family.
    
   0.495
rplQ
Unannotated protein.
    
   0.495
rpmG
Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.495
Your Current Organism:
Phormidesmis priestleyi ULC007
NCBI taxonomy Id: 1920490
Other names: P. priestleyi ULC007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.