STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7B65_07500Unannotated protein. (339 aa)    
Predicted Functional Partners:
C7B65_25660
Unannotated protein.
 
  0.970
C7B65_00690
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.793
C7B65_02930
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.784
C7B65_25650
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.775
C7B65_25630
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
  0.764
C7B65_21545
Unannotated protein.
  
     0.690
rnc-2
Unannotated protein; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
       0.651
pruA
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
  
 0.619
C7B65_17965
Unannotated protein.
  
 0.616
lysS
Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.609
Your Current Organism:
Phormidesmis priestleyi ULC007
NCBI taxonomy Id: 1920490
Other names: P. priestleyi ULC007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.