STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE15415.1Dihydrodipicolinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)    
Predicted Functional Partners:
APE15416.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.809
APE19037.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
     
  0.712
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
  0.661
APE17837.1
Dihydrodipicolinate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.
     
  0.661
APE19441.1
Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.602
APE13988.1
DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
APE19038.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.549
APE15417.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.549
APE18203.1
Steroid delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
Your Current Organism:
Mycobacterium sp. WY10
NCBI taxonomy Id: 1920667
Other names: M. sp. WY10
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