STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO85694.1aminoacyl-tRNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)    
Predicted Functional Partners:
APO85689.1
Redox-regulated ATPase YchF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.949
APO85695.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.938
APO87081.1
asparaginyl/glutamyl-tRNA amidotransferase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.902
APO88213.1
50S ribosomal protein L25/general stress protein Ctc; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.863
APO85696.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.846
APO88276.1
Peptide chain release factor 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.770
APO86679.1
Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.698
APO88214.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.693
APO86732.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.659
APO86077.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.656
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.