STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO85927.1Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)    
Predicted Functional Partners:
APO86274.1
NAD kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.900
APO88122.1
N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.763
APO85909.1
Molybdenum cofactor biosynthesis protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.732
APO85928.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.706
APO85926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.556
APO85929.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
APO85930.1
50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.423
APO85931.1
50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.415
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.