STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO88230.1Cytochrome c family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)    
Predicted Functional Partners:
APO87957.1
Cytochrome c1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
APO87847.1
Cytochrome-c oxidase, cbb3-type subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.963
APO88418.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
APO87842.1
Nitrogen fixation protein FixH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.940
APO86345.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.924
APO87694.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.921
APO87956.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.910
APO87846.1
Cytochrome-c oxidase, cbb3-type subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.815
APO87293.1
Cytochrome c oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.800
APO87673.1
Cytochrome c oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.786
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.