STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO85968.1Acetylornithine deacetylase (ArgE); Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
APO88043.1
Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.981
APO87684.1
Ornithine carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.964
APO87685.1
Acetylornithine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.960
APO88020.1
Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.925
APO86617.1
Acetylornithine deacetylase (ArgE); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.912
APO86671.1
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.904
APO85970.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.768
APO86894.1
N-acetyl-gamma-glutamyl-phosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.735
APO86243.1
Dihydropyrimidine dehydrogenase subunit B; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.649
APO87178.1
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.601
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.