STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO86004.1HupU protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)    
Predicted Functional Partners:
APO86000.1
Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APO86003.1
HupV protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
APO85998.1
Ni/Fe-hydrogenase, b-type cytochrome subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
APO86001.1
Uptake hydrogenase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.995
APO86005.1
PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
APO85994.1
Hydrogenase expression/formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.947
APO85992.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.942
APO85995.1
Hydrogenase accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.936
APO85997.1
Hydrogenase expression/formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.935
APO86002.1
Carbamoyltransferase HypF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.933
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.