STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO86017.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
APO86019.1
Signal recognition particle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.819
APO86016.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
APO86018.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.809
APO86015.1
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.709
APO86020.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.535
APO86013.1
16S rRNA processing protein RimM; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.524
APO86011.1
tRNA (guanosine(37)-N1)-methyltransferase TrmD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.476
APO86014.1
5,6-dimethylbenzimidazole synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.456
APO85732.1
Ribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.452
APO86012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.444
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.