STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO88257.1tRNA lysidine(34) synthetase TilS; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)    
Predicted Functional Partners:
APO86228.1
Tol-pal system protein YbgF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.818
APO86227.1
Peptidoglycan-associated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.770
APO86229.1
Cell division protein FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.709
APO86725.1
Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.682
APO88256.1
Tol-Pal system beta propeller repeat protein TolB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.680
APO86226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.661
APO88058.1
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.644
APO85694.1
aminoacyl-tRNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.631
APO87957.1
Cytochrome c1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.628
APO88418.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.616
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.