STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO86669.1DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (917 aa)    
Predicted Functional Partners:
APO88179.1
DNA gyrase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
APO87031.1
DNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
APO85766.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.804
APO88018.1
Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.733
APO86667.1
tRNA glutamyl-Q(34) synthetase GluQRS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.729
APO86332.1
Cell division protein FtsZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.728
APO88362.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.698
APO86668.1
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.692
APO88014.1
Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.684
APO87624.1
DNA gyrase inhibitor YacG; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.641
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.