STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO86893.1Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)    
Predicted Functional Partners:
APO86892.1
Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.965
APO88315.1
Cytochrome c biogenesis protein CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
APO86894.1
N-acetyl-gamma-glutamyl-phosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
APO86891.1
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
APO87010.1
Phasin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
APO88341.1
SPOR domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
APO86895.1
Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.683
APO88296.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
APO86889.1
Cytochrome C biogenesis protein CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.619
APO86890.1
Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.619
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.