STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO86909.1Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)    
Predicted Functional Partners:
APO88316.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.914
APO85772.1
Translation elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.868
APO88015.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.831
APO86342.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.807
APO86007.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.786
APO86417.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.782
APO86741.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.773
APO87680.1
ATP-dependent helicase HrpB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.766
APO85775.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.761
APO86910.1
Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.754
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.