STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO87182.1Cytochrome-c peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)    
Predicted Functional Partners:
APO87183.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.836
APO87981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.814
APO87184.1
XylR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.703
APO88256.1
Tol-Pal system beta propeller repeat protein TolB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.683
APO87185.1
D-xylose ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
APO86345.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.636
APO87181.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.593
APO87187.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.593
APO87186.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.541
APO87417.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.508
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.