STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO87252.1Imidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)    
Predicted Functional Partners:
APO87255.1
Urocanate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
APO87253.1
Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.998
APO88339.1
Formimidoylglutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
APO87254.1
N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
APO88397.1
N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.855
APO87257.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.824
APO86485.1
Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.739
APO86671.1
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.650
BSK21_09480
S-(hydroxymethyl)glutathione dehydrogenase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.574
APO87069.1
Guanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.561
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.