APO87351.1 protein (Marivivens sp. JLT3646) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

APO87351.1

RNA polymerase sigma factor RpoD; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa)

Predicted Functional Partners:

APO85766.1

0.985

APO88349.1

0.983

APO88216.1

0.982

APO85767.1

0.972

APO85725.1

0.969

APO88024.1

0.883

APO88279.1

0.814

APO88179.1

0.784

APO87687.1

0.774

APO87325.1

0.735

Your Current Organism:

Marivivens sp. JLT3646

NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APO85725.1	APO85766.1	BSK21_00945	BSK21_01155	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APO85725.1	APO85767.1	BSK21_00945	BSK21_01160	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
APO85725.1	APO87325.1	BSK21_00945	BSK21_09905	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
APO85725.1	APO87351.1	BSK21_00945	BSK21_10045	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma factor RpoD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
APO85725.1	APO88024.1	BSK21_00945	BSK21_13990	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcription termination/antitermination protein NusA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
APO85725.1	APO88216.1	BSK21_00945	BSK21_01330	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APO85725.1	APO88279.1	BSK21_00945	BSK21_05360	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase-binding protein DksA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.834
APO85766.1	APO85725.1	BSK21_01155	BSK21_00945	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APO85766.1	APO85767.1	BSK21_01155	BSK21_01160	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APO85766.1	APO87325.1	BSK21_01155	BSK21_09905	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
APO85766.1	APO87351.1	BSK21_01155	BSK21_10045	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma factor RpoD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
APO85766.1	APO88024.1	BSK21_01155	BSK21_13990	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcription termination/antitermination protein NusA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
APO85766.1	APO88179.1	BSK21_01155	BSK21_14845	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA gyrase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.857
APO85766.1	APO88216.1	BSK21_01155	BSK21_01330	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APO85766.1	APO88279.1	BSK21_01155	BSK21_05360	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase-binding protein DksA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765
APO85766.1	APO88349.1	BSK21_01155	BSK21_10050	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
APO85767.1	APO85725.1	BSK21_01160	BSK21_00945	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
APO85767.1	APO85766.1	BSK21_01160	BSK21_01155	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APO85767.1	APO87325.1	BSK21_01160	BSK21_09905	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
APO85767.1	APO87351.1	BSK21_01160	BSK21_10045	DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma factor RpoD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972