STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO87483.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
APO87482.1
2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
APO87491.1
Galactonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
APO87394.1
Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.969
APO85954.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.925
BSK21_10810
DNA-binding transcriptional regulator; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.922
APO87484.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
APO87485.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
APO87486.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
APO87490.1
Galactose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.737
APO87487.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.678
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.