APO88404.1 protein (Marivivens sp. JLT3646) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

APO88404.1

Ribosome silencing factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)

Predicted Functional Partners:

APO87834.1

0.981

APO85785.1

0.951

APO86758.1

0.944

APO85786.1

0.939

APO87737.1

0.937

APO85931.1

0.928

APO85799.1

0.926

APO86009.1

0.926

APO86741.1

0.926

APO85775.1

0.925

Your Current Organism:

Marivivens sp. JLT3646

NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APO85775.1	APO85785.1	BSK21_01200	BSK21_01255	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APO85775.1	APO85786.1	BSK21_01200	BSK21_01260	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APO85775.1	APO85799.1	BSK21_01200	BSK21_01335	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APO85775.1	APO85931.1	BSK21_01200	BSK21_02070	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APO85775.1	APO86009.1	BSK21_01200	BSK21_02510	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APO85775.1	APO86741.1	BSK21_01200	BSK21_06710	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APO85775.1	APO86758.1	BSK21_01200	BSK21_06800	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
APO85775.1	APO88404.1	BSK21_01200	BSK21_12895	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosome silencing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
APO85785.1	APO85775.1	BSK21_01255	BSK21_01200	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APO85785.1	APO85786.1	BSK21_01255	BSK21_01260	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APO85785.1	APO85799.1	BSK21_01255	BSK21_01335	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APO85785.1	APO85931.1	BSK21_01255	BSK21_02070	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APO85785.1	APO86009.1	BSK21_01255	BSK21_02510	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
APO85785.1	APO86741.1	BSK21_01255	BSK21_06710	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APO85785.1	APO86758.1	BSK21_01255	BSK21_06800	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
APO85785.1	APO88404.1	BSK21_01255	BSK21_12895	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosome silencing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
APO85786.1	APO85775.1	BSK21_01260	BSK21_01200	50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
APO85786.1	APO85785.1	BSK21_01260	BSK21_01255	50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
APO85786.1	APO85799.1	BSK21_01260	BSK21_01335	50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
APO85786.1	APO85931.1	BSK21_01260	BSK21_02070	50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L20; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994