STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APO87966.11-deoxy-D-xylulose-5-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (641 aa)    
Predicted Functional Partners:
APO86793.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
APO88419.1
Farnesyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.985
APO85728.1
Pyridoxine 5'-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.922
APO86721.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.906
APO86241.1
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.898
APO85722.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.890
APO87967.1
Exodeoxyribonuclease VII small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.832
APO85886.1
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.822
APO87970.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.750
APO87968.1
Acetoin utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.744
Your Current Organism:
Marivivens sp. JLT3646
NCBI taxonomy Id: 1920883
Other names: M. sp. JLT3646, Marivivens sp. CGMCC 1.15778
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.