STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMC67627.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)    
Predicted Functional Partners:
OMC67689.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.835
OMC66224.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.581
OMC69127.1
Aminoglycoside resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
OMC67628.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.549
OMC67626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.472
OMC66217.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
OMC71752.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.438
OMC64004.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
Your Current Organism:
Paenibacillus sp. FSLH70326
NCBI taxonomy Id: 1921144
Other names: P. sp. FSL H7-0326, Paenibacillus sp. FSL H7-0326
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.