STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API58049.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)    
Predicted Functional Partners:
API58048.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.895
API58047.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.884
API58050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.793
BSL82_13020
acyl-CoA synthetase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
API58382.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.641
API58046.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.630
API59355.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.595
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
  
 0.583
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
    0.580
API61202.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.569
Your Current Organism:
Tardibacter chloracetimidivorans
NCBI taxonomy Id: 1921510
Other names: JJ-A5, KACC 19450, NBRC 113160, Sphingomonas sp. JJ-A5, T. chloracetimidivorans
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.