STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API58258.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)    
Predicted Functional Partners:
API61109.1
Gliding motility-associated lipoprotein GldK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.922
API60351.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.639
API58257.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.524
API58259.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.506
API60480.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.485
API58260.1
5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.483
API60835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.458
API57894.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.449
API58413.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.449
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.449
Your Current Organism:
Tardibacter chloracetimidivorans
NCBI taxonomy Id: 1921510
Other names: JJ-A5, KACC 19450, NBRC 113160, Sphingomonas sp. JJ-A5, T. chloracetimidivorans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.