STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API59327.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
API61036.1
IS21 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
API60933.1
IS21 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.793
API60939.1
IS21 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.793
API61184.1
IS21 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.793
API60148.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.717
API60159.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.717
API59326.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.565
API59328.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.510
API58032.1
TIGR00645 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.479
API58557.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.447
Your Current Organism:
Tardibacter chloracetimidivorans
NCBI taxonomy Id: 1921510
Other names: JJ-A5, KACC 19450, NBRC 113160, Sphingomonas sp. JJ-A5, T. chloracetimidivorans
Server load: low (16%) [HD]