STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API61040.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
API59358.1
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.958
API59906.1
DitF protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.890
API59900.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.888
API60291.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.888
API59396.1
Lipid-transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.886
API59356.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.823
API60292.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
API61112.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
API58702.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.720
API59795.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.715
Your Current Organism:
Tardibacter chloracetimidivorans
NCBI taxonomy Id: 1921510
Other names: JJ-A5, KACC 19450, NBRC 113160, Sphingomonas sp. JJ-A5, T. chloracetimidivorans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.