STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API59515.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (762 aa)    
Predicted Functional Partners:
API59514.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.782
API59513.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
API59516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
API59519.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.750
API59520.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.599
API59517.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.598
API59518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.584
API59521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.584
API59526.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.473
API58270.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.439
Your Current Organism:
Tardibacter chloracetimidivorans
NCBI taxonomy Id: 1921510
Other names: JJ-A5, KACC 19450, NBRC 113160, Sphingomonas sp. JJ-A5, T. chloracetimidivorans
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.