STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API59696.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)    
Predicted Functional Partners:
API59697.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.866
API58032.1
TIGR00645 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.768
API59698.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
API59663.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.470
API58557.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.447
API61098.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.447
API58111.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.434
API58489.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.434
API58621.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.434
API59755.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.434
Your Current Organism:
Tardibacter chloracetimidivorans
NCBI taxonomy Id: 1921510
Other names: JJ-A5, KACC 19450, NBRC 113160, Sphingomonas sp. JJ-A5, T. chloracetimidivorans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.