STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH23803.1HlyD family secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)    
Predicted Functional Partners:
OKH23802.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.947
OKH26206.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.875
OKH23296.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.874
OKH26134.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.808
OKH23801.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.781
OKH25174.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.682
OKH23297.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.668
OKH26207.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.661
OKH20821.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.648
OKH23264.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.647
Your Current Organism:
Hydrococcus rivularis
NCBI taxonomy Id: 1921803
Other names: H. rivularis NIES-593, Hydrococcus rivularis NIES-593, Hydrococcus rivularis Yu-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.