STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH23481.1Putative bicarbonate transporter, IctB family; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)    
Predicted Functional Partners:
OKH25532.1
Glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.859
OKH26792.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.771
OKH25234.1
Pyruvate/2-oxoglutarate dehydrogenase complex,dihydrolipoamide dehydrogenase (E3) component; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.748
OKH20620.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
OKH22824.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.637
OKH25659.1
Segregation/condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
     0.612
OKH23480.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
OKH25230.1
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.523
OKH18369.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.519
OKH26809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
Your Current Organism:
Hydrococcus rivularis
NCBI taxonomy Id: 1921803
Other names: H. rivularis NIES-593, Hydrococcus rivularis NIES-593, Hydrococcus rivularis Yu-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.