STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKH21183.1Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (491 aa)    
Predicted Functional Partners:
petE
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.
   
 0.973
OKH20083.1
Biphenyl 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.894
OKH19154.1
Proteinase inhibitor I4 serpin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the serpin family.
    
  0.889
tatC
Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.870
OKH20883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.854
OKH20885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.854
OKH20890.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.854
OKH20228.1
Nitric-oxide reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.807
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.773
OKH20879.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.758
Your Current Organism:
Hydrococcus rivularis
NCBI taxonomy Id: 1921803
Other names: H. rivularis NIES-593, Hydrococcus rivularis NIES-593, Hydrococcus rivularis Yu-52
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.